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Submitted SNP(ss) Details: ss163157523           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_20883933
RefSNP(rs#)rs12028811
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss163157523|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 TGACAAGGGA TGCTGGTGGC AGCCTGTGTC TGGAGCAGAG CCCTGCCCGC CTAGTCCCCA
 CTGCGCCTGG AGAGAGGATC AGGGCCGCCC TGCCAAGTTA GAAGGGAGAG CTGGGAGGAA
 GCTATGGCAC CCCCGCCTCC ATCCTGGAAG GCAGCCCCTT CCCACCTCAC CGTGGGGTCC
 CGCCAGCCCC ATGCTCTGCT GCTTACCGGG CCAGCACCTG CTGCTGGTCC ACAACGGGCA
 GCGGGTCATC
 R
 GTCAGCACTG CCACCTCCAT GCCCACGCTC TCCCTCTTCA CACCAGCTGT GGCCGGCAGG
 GGCTCAGGCT GAGCCACCAG GGCCACCGGG GCCTGAGCCT CCAACCACAC GCCAGGCTCT
 GCTGTCCGCA CCACCTCTAA GGCCACTTCC GAGGCCAGAT CTACCTCCTG AGTGTGAAGA
 GAAACCCAGG TGGAGGTGGG AAGGCCGCCC CAACCCCCGC CGACAGCTCC CAGGTGGCTC
 AATCCCAGAC

  Submitted Frequency for ss163157523 back to top
There is no frequency submission for ss163157523.


  dbSNP summary of Genotypes for ss163157523 back to top
No sufficient data to compute Hardy-weinberg probability for ss163157523.


  Submitted individual genotype for ss163157523 back to top
There is no individual genotype data for ss163157523.