NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss163703132           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chr1_833268
RefSNP(rs#)rs11516185
Submitted Batch IDNA07022_snpassay_chr1
Submitted DateSep 28, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 28 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss163703132|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 AGGAAAACTT CCCCTCCTCG GGGATCCCGC AGGGCTAAGA AACACCCTCT TCACCTCCCT
 CCTGCCCGGT CCTTCTGACC AGCCGAGAGA GTACAGACCC TCCCCGATCT GGGAGGAGGG
 CCCATCACTG GCTCCCTGCC CCCTGCTCGC CAAGCCCCCC GGGACTTCCC AGGCTGTTCC
 TTCCACCTGA AGGGTCTCCC TCTGGCCAAG GCGAGGCTCA CAGTTCCCCT GTCAGGATGG
 GGCCTTAGAC
 R
 CCCAGACTGA CCCAGTGACA ATCACCTTAA TTCTCCACAG ATAACTACCT ACAAGTTTTC
 TGATTTATTC ATTAGTGGAT TTGTTCGTGA TCAGCCCCAC ACCTGTTAGA ATGGAAGCTG
 CAGGCAGCAG GAACCAGTGT GGCCAAGTCG GAGGGCAGCA CAAGCCGGTC CTCCTCGTGG
 ACAGCAGGTG TGGAGCAGGC CAGGCCCACA GGAGGGCGGG CAGGAGGGCA GGCACCGAGA
 GGTGCGGATG

  Submitted Frequency for ss163703132 back to top
There is no frequency submission for ss163703132.


  dbSNP summary of Genotypes for ss163703132 back to top
No sufficient data to compute Hardy-weinberg probability for ss163703132.


  Submitted individual genotype for ss163703132 back to top
There is no individual genotype data for ss163703132.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement