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Submitted SNP(ss) Details: ss163728475           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chr1_2984196
RefSNP(rs#)rs4648359
Submitted Batch IDNA07022_snpassay_chr1
Submitted DateSep 28, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 28 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss163728475|allelePos=251|len=501|taxid=9606|alleles='C/G'|mol=Genomic
 CAGAAGGACC TGGAAGGTCC ACCAGGGTGT TTAGTAGGTG CTTTTTCCTG GAATTTGGGG
 TCCTGGAGCC AGGCTGGGGT GCTTTACAAT GTCTCCTCCA ATCAGCCAGG CAGTCAGATG
 GGGAGTTTTG TTTTTATCTC CTTGGCCTGT TTGGGAAGCT GATTGGTCAG TCCTCAGCCT
 CAGCCTTTGT GGGTGTTGTG CAGGGTGGGT GTGCAGGCTG CAGGTGCTCA CAGGCCAGGC
 CCCGTGCGTG
 S
 ACCACCAGCA CTGTATCGTT GCTGTAGGCA GGGCCCGGGC CACATCATAA AGCCAAACCA
 CACTGGGGTC TCCCCTAGCC TGCAGCAGGA GAACCACTTT GACCCCTGCC TTAGAGCTCA
 GCCCTGAAAT AAAACATGAA ATGATTGTTA GCTGCTCATT TCAAACTAGG AGGCACAGGT
 GCCAGAATCT GTTCTGGCCC CTGCCACATG CAGTGGATGC CTCCCCTACT GCCTCCCCAC
 ACTCAGCCTC

  Submitted Frequency for ss163728475 back to top
There is no frequency submission for ss163728475.


  dbSNP summary of Genotypes for ss163728475 back to top
No sufficient data to compute Hardy-weinberg probability for ss163728475.


  Submitted individual genotype for ss163728475 back to top
There is no individual genotype data for ss163728475.

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