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Submitted SNP(ss) Details: ss163739405           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_99839103
RefSNP(rs#)rs7518025
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss163739405|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TGGGAGATGT CAAGGAGAGG GGAAGACAGA GAAAAGAAAC TGAGCTTTTT CTCCGCTGAG
 AAAGTGCACA ATTTTTCGGA GAGCCCAAAA CTCCATGAGA AAAAGGTTCT TCTTATTGTT
 TGCTCTTTCC TCTCACAGCA GCCTAGCTGG AAAGCAAAGT CAGCTGGAAA AACACAATGC
 AACCTTCTGT TCAAGGGAAA GTGGAGGAAA AAGAAGTCCA AGGTTGCCTC CTTCTTACCC
 ACTCTTGAGG
 Y
 ACATTTTTAT CCCATTGTTG GACTCTGCGT TTTCCCAGGG GTTGCCATGG CATCAAAGAG
 ACAAATGCCT TGCTCCTGTT TTAAAGCTGA ATTCCCTAGC AAACAAAATT GTTTCCATTT
 GAGGATATTC TCACCCTCAC ACGAAACCAG AACTGCTTTC AAAACAATGT GTCTTTTTAA
 AATATGGATG AAATGTATTG CATTCTTCTG GTAATAGAAG AAACATATTT TTATTTTTAA
 AATGCATAAA

  Submitted Frequency for ss163739405 back to top
There is no frequency submission for ss163739405.


  dbSNP summary of Genotypes for ss163739405 back to top
No sufficient data to compute Hardy-weinberg probability for ss163739405.


  Submitted individual genotype for ss163739405 back to top
There is no individual genotype data for ss163739405.

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