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Submitted SNP(ss) Details: ss163884539           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr7_27913380
RefSNP(rs#)rs200
Submitted Batch IDNA19240_snpassay_chr7
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss163884539|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 AAGCTGCTAA TGAGATGATG CGTAACTTTC CCCATAAACT AGAAGAAATT TAAAAACTGA
 AGAGAAAGTT GCACTAAGGC TCTTAGAGTT TTAAATCCAG TATTCAGCTG GGAACACAGC
 CTGGTGGGTG AAAAAATCTA GGTTCTGAAG GCAAACTCTT AATCTGAGTT AGTTGGTGTT
 CAAGCTTAGA AAATTAATGA CTCCTTCTCA TCTTGGGGTC CTCCTTATAA AACAGAGGTA
 ATCCTAACAC
 Y
 TACCTCATGG GGTTTATTAT CAACATCTCA TTGGATAAAT GCATGAAAAG CCCTTGGCTC
 CACATAATAC TCAATATATG TTAGGAGACC ACTCAGAGTT GTGGTATTTC CATGGGTGCT
 GGCCTTGTGC TCCTGACCCT TTCCCAGGAA GGAGAAATTG TTTATAAATT TAACTGCCAT
 CTAGGAGAAT TCTTACATAA GAGGTAATTT CTTGGGGGAA CCTATGCAGT CCACAGTTGG
 GCTAAGATAG

  Submitted Frequency for ss163884539 back to top
There is no frequency submission for ss163884539.


  dbSNP summary of Genotypes for ss163884539 back to top
No sufficient data to compute Hardy-weinberg probability for ss163884539.


  Submitted individual genotype for ss163884539 back to top
There is no individual genotype data for ss163884539.

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