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Submitted SNP(ss) Details: ss163909221           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chr1_18494573
RefSNP(rs#)rs223201
Submitted Batch IDNA07022_snpassay_chr1
Submitted DateSep 28, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 28 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss163909221|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 CACATCTATC AAATGCTTTT CTAGGTCTTA GCCCCAGAGC CCAGAACTCC CAGGTTGGAA
 TTGACAAGAA TGTATTCCCT CCAAGGCTAT TTAGTTGAGC ACCTACTAGG ACCTTGGCTT
 GGTGGAAGGT GCCCAGGGAT ACAGGGGGAA TGAGAAAAGC ACGGCTTTGC AATCTAGTCG
 GAGAGACATG GCAAAATGTA GATGAATACA TCATTCCACA TTCTGCAAAG AAGTGATTCT
 AAACCATGGG
 Y
 GTGTAATGAA GGGGCAAGTG GGGTGCAGTA CCGGGAAGGA ATGAGATGCT GGGTGCCATT
 TAGATGGGTG GTCAGGCAGG GCCATCGAGG AAGGTGGCAC TTGGGTGGAG AACTGAGGGC
 AGGAAGGAGC CCTCTGTGAA AGGGAGGAGG CAGATGTGGC CGACAGTTAT CCCACCCTGC
 CCACTTCCTC TTACCCCTCG CTCTTCCTGG CAGTGCCAGC ATCCTTGGTG CTTCCACAGG
 GCTTTCTCAG

  Submitted Frequency for ss163909221 back to top
There is no frequency submission for ss163909221.


  dbSNP summary of Genotypes for ss163909221 back to top
No sufficient data to compute Hardy-weinberg probability for ss163909221.


  Submitted individual genotype for ss163909221 back to top
There is no individual genotype data for ss163909221.

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