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Submitted SNP(ss) Details: ss163917802           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr4_100458342
RefSNP(rs#)rs1229984
Submitted Batch IDNA19240_snpassay_chr4
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginG:Germline A:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss163917802|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 GGAAACTCCT GAAGTCCTGG CTGCGCGGTG ACCTTGTGCA AGCACTTTCG TCTCTCATTG
 CCTTGGTTTC CTTATCCAGG CTGGGAAATC CTGGATGGTG AACCACACGT GTTCCCTGAG
 TGTGAATCCT GTACCTGGTT TGACTGTAGT CACCCCTTCT CCAACACTCT CCACGATGCC
 GGCTGCCTCA TGGCCTAAAA TCACAGGAAG GGGGGTCACC AGGTTGCCAC TAACCACGTG
 GTCATCTGTG
 Y
 GACAGATTCC TACAGCCACC ATCTACAGAA TAAAGAGAAG CTGTTCAGAT TCAGAAAAGA
 TTGTAACTAG ATGAATTTAA CATACCCAAA TTCCTGAAAT TGTGTTTCTA AAATGTATTT
 GAGGGTTTTG CTACTAATCC CTACTATTCC TAAATATGAA AGATTCAGTT TATCCCCAAG
 GTTATTCAGT CTAAAGCCCT TCTCTACCTT CCCTTCTTGA ATTAAACAAT TTAGAATAAT
 CTGTGAAATA

  Submitted Frequency for ss163917802 back to top
There is no frequency submission for ss163917802.


  dbSNP summary of Genotypes for ss163917802 back to top
No sufficient data to compute Hardy-weinberg probability for ss163917802.


  Submitted individual genotype for ss163917802 back to top
There is no individual genotype data for ss163917802.

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