| Submitter | | Handle | CSHL-HAPMAP | | Submitter SNP ID | CSHL-HuAA-200402.chr1.NT_077402.1_45162 | | RefSNP(rs#) | rs10399749 | | Submitted Batch ID | CSHL-HuAA-200402 | | Submitted Date | Feb 17, 2004 | | Publication Cited | [1] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Feb 17 2004 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_077402
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CSHL-HUAA-200402 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c/t_g |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence position qualityHuAA505s19600402217381.F -142 39 |
>gnl|dbSNP|ss16401979|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic TTTCATtctt tctttctttt ttaaggggca gggtctcact atgttgctga ggctggtctc
aaactcctga cctcaagcaa tctgtctgct tcagcctccc aagtagctga gaatacaggg
acaagccatt gcacctgacC CTGGTACTAT TTCTTGAGTT CCTGATCCAC AGATCTAACC
TCCTACTTTC CTGGATGCCA CACAAGATCT TCCACTCAAC AAGTCTGCAA CTAAACTAGC
CTTCCTCTTT TCAAACCTAC TCTTCTTTCA GTGTTCTCAG TCACAATAAT TTGTACCAAC
TAGTTACCTA GTTGCACAAC CCAAAATCTG GGAAAAATAA TAGATTTCTT TCTCCATAGT
ACCCCCAAAT CAATAAATCA TCAAGTCTTA TTCTACCTTC CAAAGAGCCT TACATATGTT
CCTTTATTTT CATCTGTAAC ACCACTATTC CTGTCTAAGC CTACCTATGT CATTTTTGGA
AGAGAATATA GTCACCTATG
Y
GACCTTCCCA CTTAAAATCC TACTATTTAC GCTTCAGTAA AAGAAAAAAA ATTTTTAATC
TAAGTATGTA ATTCTTTTGC TGAAGACACT TCACTTGCTT CTGTGCCCTT AAACTGGTAT
GTTATCATGG TATAGTAGGC CATCCAAGAC CTGGCTTCCT TCCTTTTTTT CAGTCTCAGA
GAATAACATA CTCTTTCCCT GCAACTCCAG ATCCAATTTG GTTTTCTTTT ACTTGCCTGG
AAACTCCAAA ATCTATCAAC TCTGGGGCTT TCCACTAGCT AATCATTTTG TATACAATAT
TTGTCCTTCA TGTTTTGCCT CTTAACATCT CAGCTTTCAG TTTCATCATT TTACCAGGGA
GGCCTCCCAG AACCTGAGTC CAGAAGAGTT CCTTCCATTG TATATTCCTC TAGCACTACC
TATTACCTCT TTTGTAAGAC TAACAGCCCT CAAAATTTTT CATTCAGTGA TGTCTTCCTC
ATTGCATTTT AAGTTCAACA
There is no frequency submission for ss16401979.
No sufficient data to compute Hardy-weinberg probability for ss16401979.
There is no individual genotype data for ss16401979.
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