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Submitted SNP(ss) Details: ss16409082           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr1.NT_004321.15_1029516
RefSNP(rs#)rs7416185
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600402474334.F -62 41

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16409082|allelePos=501|len=1001|taxid=9606|alleles='T/C'|mol=Genomic
 GTTGAGACCC CTACAGCAGG GCTGAACAGG GACAGGGTTG AGATAAAACa ggagggtttt
 tataaagctt aaataagctg agtacttagt actggcttgt cccatggtgt ccccggaata
 ctctgagtgc tctagcttac caccaagctt actgaccaca atcctcagga atctctggtc
 aaaatcctct gctgaatccc acactcaggg tgcaacttca cacagcgaga gagagcccca
 cgttggagcg ccggatgtag ggaccagccc cacagtgttg gtgcgttctg ctccccatgt
 gcggagatga gagattgtag aaataaagac acaagacaaa gagataaaaa gaaaagacag
 ctgggcctgg gggaccacca ccaccaagac gcggagaccg gtagtggccc cgaatgcctg
 gctgcactgt tatttattgg atacaaacca aaagggacag ggtaaagagt gtgagtcatc
 tccaatgata ggtaaggtca
 Y
 gtgggtcaca tgtccactgg acagggggcc ctttcctgcc tggcagccga ggcagagaga
 gagggggaga gagagagaga gacagcttac gccattattt ctgcttatca tagactttta
 gtactttcac taatttgcta ctgttatcta aaaggcaaag ccaggtgtgc aggatggaac
 atgaaggcgg actaggagcg tgaccactga agcacagcat cacagggaga cggttaggcc
 tccggataac tgcgggcgag cctaactgat gtcaggccct ccacaagagg tggaggagca
 gagtcttctc taaactcccc cagggaaagg gagactccta agtagcaggt gtttttcctt
 gacactgatg ctactgctag accacggtct gcctggcaac gggcatcttc ccagacgctg
 gtgttaccgc tagaccaagg agccctctgg tgaccctgtc tgggcataac agaaggctcg
 cactatcgtc ttctggtcac

  Submitted Frequency for ss16409082 back to top
There is no frequency submission for ss16409082.


  dbSNP summary of Genotypes for ss16409082 back to top
No sufficient data to compute Hardy-weinberg probability for ss16409082.


  Submitted individual genotype for ss16409082 back to top
There is no individual genotype data for ss16409082.