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Submitted SNP(ss) Details: ss16413273           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr1.NT_004321.15_1107016
RefSNP(rs#)rs3205087
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600402610628.R -79 57

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16413273|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 AAAATGATGT CTCTAACCTT ACTTTGCAGA ATAGAAAAGA AACGCACCAT CATTCCTACA
 CTGGTGGAAG CAATTAAGGA ACAAGATGGA AGAGAAGTGG ACTGGGAGTA TTTTTATGGC
 CTGCTTTTTA CCTCAGAGAA CCTAAAACTA GTGCACATTG TCTGCCATAA GAAAACCACC
 CACAAGCTCA ACTGTGACCC
 R
 AGCAGAATCT ACAAACCCCA GACAAGGTTG AAGCGGAAGC AGCCTGTGCG GAAACGCCAG
 TGACACGTAC ACACCACGTC CTGGTCTTTG TTTGAGGCCT GACGTGGGCA TCATTTTAAC
 AGGTGCCTTT TTTGTTTTTT TGTTTTTCGT TTTTTTGGTC ACTCCAGTAG CTCCTGGAAA
 AAACCTTAAA AAATGTTTCC

  Submitted Frequency for ss16413273 back to top
There is no frequency submission for ss16413273.


  dbSNP summary of Genotypes for ss16413273 back to top
No sufficient data to compute Hardy-weinberg probability for ss16413273.


  Submitted individual genotype for ss16413273 back to top
There is no individual genotype data for ss16413273.

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