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Submitted SNP(ss) Details: ss16414892           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr1.NT_077402.1_4536
RefSNP(rs#)rs4690
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA508s19600403544719.F 74 48

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16414892|allelePos=201|len=401|taxid=9606|alleles='G/C'|mol=Genomic
 GGCTGGGTGG AGCCGTCCCC CCATGGAGCA CAGGCAGACA GAAGTCCCCG CCCCAGCTGT
 GTGGCCTCAA GCCAGCCTTC CGCTCCTTGA AGCTGGTCTC CACACAGTGC TGGTTCCGTC
 ACCCCCTCCC AAGGAAGTAG GTCTGAGCAG CTTGTCCTGG CTGTGTCCAT GTCAGAGCAA
 CGGCCCAAGT CTGGGTCTGG
 S
 GGGGAAGGTG TCATGGAGCC CCCTACGATT CCCAGTCGTC CTCGTCCTCC TCTGCCTGTG
 GCTGCTGCGG TGGCGGCAGA GGAGGGATGG AGTCTGACAC GCGGGCAAAG GCTCCTCCGG
 GCCCCTCACC AGCCCCAGGT CCTTTCCCAG AGATGCCTGG AGGGAAAAGG CTGAGTGAGG
 GTGGTTGGTG GGAAACCCTG

  Submitted Frequency for ss16414892 back to top
There is no frequency submission for ss16414892.


  dbSNP summary of Genotypes for ss16414892 back to top
No sufficient data to compute Hardy-weinberg probability for ss16414892.


  Submitted individual genotype for ss16414892 back to top
There is no individual genotype data for ss16414892.

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