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Submitted SNP(ss) Details: ss16416864           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr1.NT_004321.15_112882
RefSNP(rs#)rs3100865
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600402349524.F 500 39

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16416864|allelePos=201|len=401|taxid=9606|alleles='T/G'|mol=Genomic
 CATGAGCTTC ATCTACATGG GTGGGGGACG GCGGCTTGGG GCCTTGATTC AGGTGCTGGG
 GCCCCTTCTG TCCCTGTCCC TGCCCTGAGG ACTGTTGGGG TCAACCCTGG CTGAGTGTGG
 ACGTTGCTGG TTCAGCGGAT ACCCTGAGTG CCGAGGCCAG GTAGGCCGCT GGGGCTCAGG
 GGGACAGGCT GGCTGAGGAC
 K
 CTGGGGATCA CGAGTCCGTG GTGGGCTTTG GAGCCAGCCT GGGTGGGGCT CCAGGTGGGG
 ACAGAGGAGG CTCTGTGTCT GGGCTCTGGG GGCCCCGCTG GAAGAGGCCA AGGACATCAG
 AACTGACGGG AGGACCAGGA AGGGGTGGCC GGGGGCTGAG GGAGGTGGGG AAGTCGGGGG
 CCCGAAGCCA AGGGTGGGGG

  Submitted Frequency for ss16416864 back to top
There is no frequency submission for ss16416864.


  dbSNP summary of Genotypes for ss16416864 back to top
No sufficient data to compute Hardy-weinberg probability for ss16416864.


  Submitted individual genotype for ss16416864 back to top
There is no individual genotype data for ss16416864.

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