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Submitted SNP(ss) Details: ss16418774           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr1.NT_004321.15_1043867
RefSNP(rs#)rs9424287
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600402532250.R 402 57

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16418774|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 AGGTAACAAC TCGAATGCAA ACACAAAGGC TCCCACATTC TGGAGATAAC CAGGGGAAAA
 GATGTATGTG CAGTGAAAAC TGCTTCTATT GGGTAGAAAA GGGGCAGGAT GCCCTGTAGG
 AAAAGCAGCC CCTGGAGGAA GGCGGATGGA AGCGGGGCAG GACGGCGCCT CTGTCTGGGG
 TGGAGGAAGG CAGATGGAAG
 Y
 GGGGCAGGAT GGCGGCCTCT GTCCAGGGTT CTTCCAAGAT GCCTGATTCT ATCGACCCGG
 AAACATGTCT TCTGTAATTA CAGAACTTAA TTCTTTAAAG TCCCCTAGAA ATGTAATATA
 AAATGAATGT ATTTACAGTT GGTGGCACTG CTAGCCAGGG CTCACCCAAG TCCCTCCAAC
 ACAGGGCCAC TGGGACCCCC

  Submitted Frequency for ss16418774 back to top
There is no frequency submission for ss16418774.


  dbSNP summary of Genotypes for ss16418774 back to top
No sufficient data to compute Hardy-weinberg probability for ss16418774.


  Submitted individual genotype for ss16418774 back to top
There is no individual genotype data for ss16418774.