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Submitted SNP(ss) Details: ss16425121           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr1.NT_077402.1_77053
RefSNP(rs#)rs1524602
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600401976733.F -201 62

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16425121|allelePos=501|len=949|taxid=9606|alleles='G/A'|mol=Genomic
 TGTCTATACA TATCCTATCT ATACATATTG AGGATTAACA GGTGCTAGTA GAAAATATTA
 ACTTTCTTTG TATTAACAGG TGTTAGTAGA AAGTAGTAGT AGGTGCTAAG ATAAAAGCCA
 TAATTAAACC TCCTGGTGAA TGAACACACC ATCACCTACA ATCTTACCAA AAATAGAATC
 AAGCACGTGT CCTAGTCAAA CCTCTGGATT CAACTGTCAT TTGGATAAAA CGCAAAGGAT
 AGTGAAAATG TCGATCTTCA CTGAGAGTCT AACCAGCAAA TTTCACAGTG TGGACATCAA
 GTGACAAAAA TCCCAAATTT TTCAACAAAT ATATTGTATG GGAAAGAAAA CTTTGAAAAG
 AAACCTGTAT GTTAGAAGAG ATTTTAAAAA CATGACAAAT GAAAAAAAAT GGGCAAGACT
 AAAACTTTTA AAAAAGtttg agacagggtc tcactctgtc acccaggctg gagtgcagtg
 gtgtgaccat ggctcactgt
 R
 gcctcaacct cctggctcaa gtgatcctac cacctcagtc ttccatgtag ctgggactac
 agctgcgtgc caccacatct ggctcatttt tttttctttt ttaagtagag acggggactt
 gctatgttgc ccaggctagt ctcaaactcc taagcacaag cgatcctccc gcctcggccc
 ctgaaagtgc tgggattgca ggcatgagcc accacacccg gccAAAAGTT GCTTTTGAGG
 AGTTATTGCT GTGTGGATGT GATATAACCC TTTCTGTCAT CTCTTCACAA AACTTTCTGT
 AAAACATAAA AATCACCTGG ACCTTCAGAG ATGAGTTTGt ttattttttt attttttaaa
 aaattGCTAA TTTACAGAAC ATGGAGATGA GTATGTTTTG AAGGCTTGGA AGCATGCAAG
 TGGGAGAAGA AAGGAGTCAG CTACATTC

  Submitted Frequency for ss16425121 back to top
There is no frequency submission for ss16425121.


  dbSNP summary of Genotypes for ss16425121 back to top
No sufficient data to compute Hardy-weinberg probability for ss16425121.


  Submitted individual genotype for ss16425121 back to top
There is no individual genotype data for ss16425121.