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Submitted SNP(ss) Details: ss16462639           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr10.NT_030059.11_8475261
RefSNP(rs#)rs701848
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA506s19600402725119.R 403 40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16462639|allelePos=230|len=430|taxid=9606|alleles='T/C'|mol=Genomic
 TTTATATTAA AAAGGACATT TGTGTTAAAA AGGAAATTAG AGTTGCAGTA AACTTTCAAT
 GCTGCACACA AAAAAAAGAC ATTTGATTTT TCAGTAGAAA TTGTCCTACA TGTGCTTTAT
 TGATTTGCTA TTGAAAGAAT AGGGtttttt tttttttttt tttttttttt tttAAATGTG
 CAGTGTTGAA TCATTTCTTC ATAGTGCTCC CCCGAGTTGG GACTAGGGC
 Y
 TCAATTTCAC TTCTTAAAAA AAATCATCAT ATATTTGATA TGCCCAGACT GCATACGATT
 TTAAGCGGAG TACAACTACT ATTGTAAAGC TAATGTGAAG ATATTATTAA AAAGGTTTTT
 TTTTCCAGAA ATTTGGTGTC TTCAAATTAT ACCTTCACCT TGACATTTGA ATATCCAGCC
 ATTTTGTTTC TTAATGGTAT

  Submitted Frequency for ss16462639 back to top
There is no frequency submission for ss16462639.


  dbSNP summary of Genotypes for ss16462639 back to top
No sufficient data to compute Hardy-weinberg probability for ss16462639.


  Submitted individual genotype for ss16462639 back to top
There is no individual genotype data for ss16462639.