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Submitted SNP(ss) Details: ss16479463           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr10.NT_077567.3_71337
RefSNP(rs#)rs6560851
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600402487787.R 322 68HuAA508s19600403312290.F 297 68

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16479463|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 GCCACAGGGG TCACAGGCTG CAGGGCCCTG ACCCCAGCCC CCAGGCAGCC AGGATGTTAT
 TGGCGAGGGG CCCTGCCCCA GGTCTATAGC TGATACCGTG TCTCCAGGGC AGGTACTGCA
 GCTCCACCAG GCTGACCTGC TCCCTCCCAA ACGTGCAGTG GTGGAAAGTG ATGATGAAAT
 TGTCGGACGG CAGGAGCACC
 R
 CCTTGGGTGG AAGCACGACA GTGCACTCAC TGCCCCACAA GATGCACTTA TGTGTGCCAC
 CAGGAGCCTG CTTGCTAGAA AGGGCAAGTG TCAGCACCAC GGGGCTGTTA CACTGTCGTG
 GTGTAGCTGC TGCCATCCTG GGGACCTCAC CCTCATCCCT GTCCAGGTGG GCATGGCCCT
 CCACGCTCAC CTAATGAAGA

  Submitted Frequency for ss16479463 back to top
There is no frequency submission for ss16479463.


  dbSNP summary of Genotypes for ss16479463 back to top
No sufficient data to compute Hardy-weinberg probability for ss16479463.


  Submitted individual genotype for ss16479463 back to top
There is no individual genotype data for ss16479463.

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