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Submitted SNP(ss) Details: ss164869544           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chr1_99848283
RefSNP(rs#)rs7554246
Submitted Batch IDNA07022_snpassay_chr1
Submitted DateSep 28, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 28 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss164869544|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TGACCTATTT TCTGTCTATA CTTTTGCCTT TCCAGAATGT CATATGAATG AAATAATACG
 ATATGTATCC TTTAGGATCT GGCTTCTTCC CCTTAGTAAA ATGCATTTAA GATTCATCAT
 GTTGTTGTAG GAATCAATTG CTCATTCTTT TTTATTGCAG AGTAGTGTAC CATGGAATGT
 ATACACCACA GTTTGTCTAT CCATTCCCCT GCTGAAAGAC ATCTTCACTG TTTCCAGTTT
 TTAGTAATTA
 Y
 GGATAAAGCT GCTCCAAACA TTTATGTGCA AGTTTTTGAA TGAATATAAA TTTTCAACTC
 ACTTGAGAAA TACCTAGGAG TATGACTTCT GGGTCATATG GTAAGTGTAT GTTTAACTTT
 ATGAGAAACT GGCAAATGGC TTTCCAGAGG CTTTTAAAAA ATATTACAGC ATAGACTGCA
 GGTTGAAAAG CAGTCTTAAA TCAGTTCAAC CATAAAATTC AATATAGCAT TAAGCATTAA
 TAGTTTATCA

  Submitted Frequency for ss164869544 back to top
There is no frequency submission for ss164869544.


  dbSNP summary of Genotypes for ss164869544 back to top
No sufficient data to compute Hardy-weinberg probability for ss164869544.


  Submitted individual genotype for ss164869544 back to top
There is no individual genotype data for ss164869544.

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