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Submitted SNP(ss) Details: ss164878987           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chr1_100620557
RefSNP(rs#)rs10875289
Submitted Batch IDNA07022_snpassay_chr1
Submitted DateSep 28, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 28 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss164878987|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 AAAGACAAAG TTGTGGTATT TTGAAAAAAC TGAATACCTT CCTCTATTCT TTTTTTTTTT
 TTTTTTTTTT TGAGAGGGGG TCTCACTGCG TCACCTGGGC TGGAGTGCCA TGGTGCAGTC
 ATAGCTCACT GCAGCCTCAA ACTCCTGGGC TTTGATGATT CTCCCACTTC AGTCAACTGA
 CTAACTGGAA ATATAGGTGC ACACTTCTGC ACCCCACCCA GCTAACTATT TTTTTTTTTT
 TTTTTTTTTA
 R
 TTTTTGTAGA GGCAGGGACA CACTATGTTG ATCAGGCTGG TCTTGAACTT CTGGGCTTAA
 GCTAGCTTCC CGCCTGAGCC TCCCAAAGTG GTGGGATTAC AGGCATGAGC CACTGTGCTT
 GGCCGTCAAT ACAGTTTTAA TTATTGATTT CATTTTCCTC TGAGAAAAAT AAAACCTGAG
 CTTGGAGAAA AAAAAAGTCT CTGAAAAAAG GGGACATTTT CTAGGGCAGT GGTTTTTCTT
 TTTTTTAATA

  Submitted Frequency for ss164878987 back to top
There is no frequency submission for ss164878987.


  dbSNP summary of Genotypes for ss164878987 back to top
No sufficient data to compute Hardy-weinberg probability for ss164878987.


  Submitted individual genotype for ss164878987 back to top
There is no individual genotype data for ss164878987.