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Submitted SNP(ss) Details: ss16510258           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr10.NT_030059.11_8372417
RefSNP(rs#)rs2943772
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600402604947.F 403 37

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16510258|allelePos=227|len=475|taxid=9606|alleles='G/C'|mol=Genomic
 AGGCGCGGCG GCGGCGGCGG CACCTCCCGC TCCTGGAGCG GGGGGGAGAA gcggcggcgg
 cggcggccgc ggcggcTGCA GCTCCAGGGA GGGGGTCTGA GTCGCCTGTC ACCATTTCCA
 GGGCTGGGAA CGCCGGAGAG TTGGTCTCTC CCCTTCTACT GCCTCCAACA CGGCGGCGGC
 GGCGGCTGGC ACATCCAGGG ACCCGGGCCG GTTTTAAACC TCCCGT
 S
 CGCCGCCGCC GCACCCCCCG TGGCCCGGGC TCCGGAGGCC GCCGGCGGAG GCAGCCGTTC
 GGAGGATTAT TCGTCTTCTC CCCATTCCGC TGCCGCCGCT GCCAGGCCTC TGGCTGCTGA
 GGAGAAGCAG GCCCAGTCGC TGCAACCATC CAGCAGCCGC CGCAGCAGCC ATTACCCGGC
 TGCGGTCCAG AGCCAAGCGG CGGCAGAGCG AGGGGCATCA GCTACCGCCA AGTCCAGAGC
 CATTTCCA

  Submitted Frequency for ss16510258 back to top
There is no frequency submission for ss16510258.


  dbSNP summary of Genotypes for ss16510258 back to top
No sufficient data to compute Hardy-weinberg probability for ss16510258.


  Submitted individual genotype for ss16510258 back to top
There is no individual genotype data for ss16510258.