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Submitted SNP(ss) Details: ss165475885           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_235240878
RefSNP(rs#)rs10925290
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss165475885|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 CAGTTTCCAA AGACAACCAT TGACAAGTTA ATCTCTGCTC CCCATCCACT CATATCCACT
 CATTCTCCTT AGTAATCATT GATTGCCCCT CAACGGAATG ATCTACATTC CCTATCCCTC
 CCTCCCCTCT GGAATAAGAG CATATAACAT CTGGGCCTCC CTAGGATAGG GGGTCATCTC
 TCATTGAGAT GGGGGTTCTC CCTCCCGTGC ATGTGAATCA ATTTTCATGG CTTTTCTCCA
 ATTAATCTGC
 Y
 GTTTGTCAGT TAAGTTTTCA GTGAAACTTC AGAGGGCAAA GGGGAAGTTT TCCCTTGGCC
 CCTGCAAGGG AAAGAAATGA GCCTTCTCTT CTCCCATACT CCTTACTTAC TCAGAACTGT
 GCTCTAGCAA ATGCTCAGCA CTATTTTTGT TAAAAGACTT GTCCAGAGCT GGGGCCTAGG
 ACCTAAGTCT CCAATTCTCA TTCTCCATCA TTCTAGAAGT TAGAATACTT ATGTCCTAAT
 TCTCTAATAG

  Submitted Frequency for ss165475885 back to top
There is no frequency submission for ss165475885.


  dbSNP summary of Genotypes for ss165475885 back to top
No sufficient data to compute Hardy-weinberg probability for ss165475885.


  Submitted individual genotype for ss165475885 back to top
There is no individual genotype data for ss165475885.

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