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Submitted SNP(ss) Details: ss165860163           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chr1_224640025
RefSNP(rs#)rs1805408
Submitted Batch IDNA07022_snpassay_chr1
Submitted DateSep 28, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 28 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss165860163|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 GTGGGGCCAG GTTTTTCTCC CAACAGATCC CAGGATCTTC CCCTACCCCT TACCTTTGGG
 GTTACCCACT CCTTCCGGTT GGGTGTCTGT GTCTTGACCA TACACTTGGT CCAGGCAGTG
 ACGTCCCCAG TGCAGTAATA GGCATCGCTC TTGAAGACCA GCTGACCCGA GCATTCCTCG
 CAGGGAAGGA GGGCACCGAA CACCATGCCA TCAGCTACTC GGTCCAAGAT CTGCAGCCAG
 TGGAGAAACA
 Y
 GTCAGAGGGC AAATGCGGGA CTACAAAAAA GGACACTTAC TAATGTGGGA TGGAGGAACT
 TGCACAGATT CCACTCACTA CAAAGAAGAG AGGCTTCTTG CTGTGGGCTT GCTATGGGGC
 TCTTAACACC CCACCCACCC TTGGTTTACA ATGGAGCTTG GATTCTTGTA GGAGACCTTA
 TTTCCAAGTG TTCCTGCAGC GCCCCCAACC CTCAGTGATT TAGAAATGAA GGGAAAGCAA
 CCACTGGCAT

  Submitted Frequency for ss165860163 back to top
There is no frequency submission for ss165860163.


  dbSNP summary of Genotypes for ss165860163 back to top
No sufficient data to compute Hardy-weinberg probability for ss165860163.


  Submitted individual genotype for ss165860163 back to top
There is no individual genotype data for ss165860163.

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