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Submitted SNP(ss) Details: ss165981079           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr1_795419
RefSNP(rs#)rs72631880
Submitted Batch IDNA20431_snpassay_chr1
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss165981079|allelePos=251|len=501|taxid=9606|alleles='A/T'|mol=Genomic
 AGGGGGCGCG CCCGCGGTGT CCGGGAGCCT GGCGGCGCCT GTGCAGCGGC CAGTGCACCT
 GCTCCTGCCC TCGCCTCGGT CTCTGCCAGG ACCCCGACGC CCAGCCGGAC CCTGCCCTCC
 AGCGGGGCCG CGGCTCCACG GCCCGCAACA GCAGCCCCAC CCGGCATTCG GCGCGCTCCG
 CGGGGCAGAG GTCGCGGTGT CCTCAGGCTG TGGCGCCGGC CTACAACCCC CACGCCGGGC
 CCGGGCCCCG
 W
 GATTATATTT GGGCCCCGTG TGATTATATT TGACAGGTCT TAGTTGACGC GCTGTTCAGC
 GCTTTGAGTT CGGCTGAGTT TTGGGTTGGA GAATTTTCTT CCACAGGGGA TTGTCTTGGA
 TTTTTCTATT TCTCCCTCAG TATCCACCTG GAAAACATTT CAATTAATTT ATATTCACTT
 AAACATTTCC GTGCAAAAAC TGTGTACAAA AGCCCCAAAG TATAATTTGC GCAGTTGAGC
 ACATGTTCTG

  Submitted Frequency for ss165981079 back to top
There is no frequency submission for ss165981079.


  dbSNP summary of Genotypes for ss165981079 back to top
No sufficient data to compute Hardy-weinberg probability for ss165981079.


  Submitted individual genotype for ss165981079 back to top
There is no individual genotype data for ss165981079.

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