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Submitted SNP(ss) Details: ss165981136           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr1_822781
RefSNP(rs#)rs28765502
Submitted Batch IDNA20431_snpassay_chr1
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss165981136|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 GGTTCCCCAG GCAGAGGGCT CACAGCTTTT GTGCAGCATA AATCTACTGC AACACTACCA
 GCTGTGGCAG GGGACAGACA TTGTACGGTG GGGAGGGAAT GGCCTGAGTT GGAAATGCCC
 CGGTTTAGAA CGGGCCTAGG ATGGGCCCCT CATGGTGTTT CCCGAAATCG GGTTCCGTTC
 TTCATCAAAC TTAGAGTGAC ATTGGTTAGC CCAATGATTT CCTTTTTTAC ATTTTGGACA
 TATTTCAGCT
 Y
 AGCAGTTCTC TTTTTTCCCC TATCTGACAG CCGACTCACT GATTTTTTTT CTACATTCTT
 TTTTAGTATG AATAGCTTCT TTAAATTCTT TGAGTAATTT AAAAGGAAAA GGTTCAAATG
 TAGCTATAAT ATCTCCCTGT TGATCTGGGG GGTGTATTCT AACAGGGAAC TGCCAAGCCT
 CTAAATCACC CTCTCTTCTA GCTTGCTGAA TTCCTGCCTG AATAGAACTA AGAGCAGTCG
 CTCCAGGCGC

  Submitted Frequency for ss165981136 back to top
There is no frequency submission for ss165981136.


  dbSNP summary of Genotypes for ss165981136 back to top
No sufficient data to compute Hardy-weinberg probability for ss165981136.


  Submitted individual genotype for ss165981136 back to top
There is no individual genotype data for ss165981136.