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Submitted SNP(ss) Details: ss165993864           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr1_2276268
RefSNP(rs#)rs2840531
Submitted Batch IDNA20431_snpassay_chr1
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss165993864|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 GGGGTGGACG CTGCTGTTGC CCTCCCTTTA TGGATGAGGA AACTGAGGCA CAGAGAGGTT
 TAGCTTCACA TCAGAGTGAA AGCAGCAGCC CAGCCTCCCA GGGTTGGTGT CGGATGCACC
 CGTGAGGCCC AGGCAGAGCT CGGCACCCAA CTCCAAATGT CTGTGGTTCA AGCCCCAGCG
 GGTCTTACAA AAACAAAAGC ACGTTCCTCT AGGTTTCCCA AGGGAAATAT CTTTTGTGCT
 GGAGAATTTA
 Y
 GGCTGGACAC TCACATCATC GTCAAGCCAG AAACAGCCTG AGCCGGGCTG AGAGTCGGGG
 GAGGCCCCCC AGGTAGGATC CGCCCCAGAC TCAGGCAGTG GGGCCGGCGC GGGGGGCCCG
 CGCGGGGTAG GGTGCGATGC AGGCACGAGG CTGGTTTCAA TCGAGACTTT GGCTCTGAAA
 ATCTCTCCAA GTAGAAGGCA TGGCGCCCAG TAAGTATTTT TATGCAGAAA TATGAGAGCT
 ATTCCACCTA

  Submitted Frequency for ss165993864 back to top
There is no frequency submission for ss165993864.


  dbSNP summary of Genotypes for ss165993864 back to top
No sufficient data to compute Hardy-weinberg probability for ss165993864.


  Submitted individual genotype for ss165993864 back to top
There is no individual genotype data for ss165993864.