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Submitted SNP(ss) Details: ss166169439           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr1_18025169
RefSNP(rs#)rs478698
Submitted Batch IDNA20431_snpassay_chr1
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss166169439|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 CTGGCCTCCT GACCGGAGTG GTGGTTGATT CTGGCTATGG CCTGACCCGC GTGCAGCCTT
 TCCACCAGGG CCGCCCCTTG CCCGCCAGCG GCAAGACGCT GGAGTTCGCC GGCCAGGATC
 TCTCCGCCTA TCTCCTCAAG AGTCTCTTTA AGGAAGATTG CGATAGACGC TGCCTGTTTC
 AGCTGGAGAC AGTCGCCGTG ACTCAGATGA ACAAGTGCTA CGTGCCGCAG AATCTGGGGG
 AGGCCCTGGA
 Y
 TTTCGTGAGA GGCAGCAGAG TGCCTTGGAT GAGAGCAACA CCTATCAGCT CCCAGACGGC
 TCCCGCGTGG AGCTGACCCC CATGCAGCGG GTGGCTCCTG AGATGTTCTT TAGCCCGCAG
 GTGTTCGAGC AGCCGGGGCC CAGCATCCCA CGGGCCATTG TGGAATCCGT GGAGTCCTGC
 GAGATCTCCC TGCGCCCCCT GCTGGTCTCC CACGTGATGG CCTGCGGGGG CAACACCCTC
 TATCCCGGGT

  Submitted Frequency for ss166169439 back to top
There is no frequency submission for ss166169439.


  dbSNP summary of Genotypes for ss166169439 back to top
No sufficient data to compute Hardy-weinberg probability for ss166169439.


  Submitted individual genotype for ss166169439 back to top
There is no individual genotype data for ss166169439.

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