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Submitted SNP(ss) Details: ss166178836           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr1_18624070
RefSNP(rs#)rs6603895
Submitted Batch IDNA20431_snpassay_chr1
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss166178836|allelePos=251|len=501|taxid=9606|alleles='A/T'|mol=Genomic
 TTTGTACCTC TTTGTAGATG CCTAGTGCGT CCTTGGTCAA GTTATAACCT TAGTTAAGGC
 TTATTGGTTT GGTGAGTCAT TTGGTAAGGT ATCTTTTGTT TAAAAGCAAA AAAAAAAAAA
 TGTTCAAAAG CCAAGAATAT TGGGTGTCCT GGCTGAAATC TGATAACAAA TTTTTAAAAA
 TTCTTTTAAA GATCTCTATA GTCAGAAGTC AGCTTAATTA AAAGCTAATA CTCAGGCTAG
 TATTTTTTTT
 W
 AAAAGGCTTT CTTGCTTTTT GTCCTCTGGA TCCTATTGCT GGGAAGCTTT TTAGTTGATT
 GAAACCACTT TTTAATATAT TTGGTCCCTC TGTTTGCTCC TTTTCTTGTT GGAATGACTT
 TTGCTGAGAA AAATGTCAAA CTTCATTGGC ATTTTAGAAA GCTTAAAATC TTCCCAAATT
 GGCTCCTCTA AGAATTGTCG TCTCATTTAC TTCTACTTCT ACTTCCTCTG TGCCATCTTT
 GATAGCTCAT

  Submitted Frequency for ss166178836 back to top
There is no frequency submission for ss166178836.


  dbSNP summary of Genotypes for ss166178836 back to top
No sufficient data to compute Hardy-weinberg probability for ss166178836.


  Submitted individual genotype for ss166178836 back to top
There is no individual genotype data for ss166178836.

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