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Submitted SNP(ss) Details: ss166213460           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr1_21551187
RefSNP(rs#)rs213006
Submitted Batch IDNA20431_snpassay_chr1
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss166213460|allelePos=251|len=501|taxid=9606|alleles='G/T'|mol=Genomic
 CATGCATGGT GGCACAAGCC TGTATCCCAG CTACTGGGGA GGCTGAGGTG GGAAGATCAC
 TTGAGCCCAG GAGTTCAAGA CTGCTGCACG ACACCCTGTC TCAAAAAGAA AAAAAAAACA
 GAGAAAAAAG TAAAATAGAT AATGCGGAAA TGAATACAAT GGGAAGAAAT AGTCCCTATA
 ATATCGCTCC TCAGATATTA ACCATTGGAA ACTCTTTGAT GTGATTCTGT ATTTAGCTGA
 ATTGACAGAT
 K
 TATGTCCATT TTGGGAAGAG GGAAAACGTT ATTAACGTTT TCAGAGCCTC CTTCCTCCCT
 GTCCTCTCTG AGGAAGGAAA CTTGGTGTGT CAGGCAGCTG CAGCCCGGGC TTTACCCTGT
 GAATCTGGGT AATGGGTGGA GGTGGGGGAG AAAGAAACAA ACTACAAGAG AAAGGGCAGA
 GGTTGTGGGG TGGGAAAGAT GGGGAGAGGC TGGAGCAGGG GATGAAGTGG GTCAAAGCCA
 GCGCAGGCTG

  Submitted Frequency for ss166213460 back to top
There is no frequency submission for ss166213460.


  dbSNP summary of Genotypes for ss166213460 back to top
No sufficient data to compute Hardy-weinberg probability for ss166213460.


  Submitted individual genotype for ss166213460 back to top
There is no individual genotype data for ss166213460.

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