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Submitted SNP(ss) Details: ss166240138           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr1_23751546
RefSNP(rs#)rs874515
Submitted Batch IDNA20431_snpassay_chr1
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss166240138|allelePos=251|len=501|taxid=9606|alleles='C/G'|mol=Genomic
 TTACCACATA GACTGTAAAA TGCCGCCCAC TAGTGAATGG CCTCTTTTGA AACACTTTCT
 TGCTGTTCTC TTTGTATATG GAGTTGAACC TGCAGTGGAA AATGTGATTG ACAGGGATTA
 ACATCTAGGC CCCTTGGGGC CCACCTGGAT GAACCCTCAG TGGAAGCTGG GATCATGAAC
 AATGGATATG GAACCACTGT AAGACCAGGT GGCCCCTGGC CCTGATGAAG AGAGTCAGGG
 TGTATGTGGG
 S
 TGGGGAATGG AGCAATATGG TTGTCTGTCC TGATGGTCCT GAATCTCTCA TCTCTTCCCT
 GCATAACCTA CAGTGGCATG TCTTGAAACC CCCTTTTTTT TTTGGAGATG GAATCTCACT
 CTGTTGCCCA GATGCTCAGC TCACTGTAAC CTCTGCCTCC TGGGTTCAAG TGATTCTCCT
 GCCTCAACCT TCCCTTCCCA GTAGCTGGGA TTACAGGCAC GTGGCACCAT GTCCAGCTAA
 TGTTTGTATT

  Submitted Frequency for ss166240138 back to top
There is no frequency submission for ss166240138.


  dbSNP summary of Genotypes for ss166240138 back to top
No sufficient data to compute Hardy-weinberg probability for ss166240138.


  Submitted individual genotype for ss166240138 back to top
There is no individual genotype data for ss166240138.

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