NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss166294612           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr7_24911282
RefSNP(rs#)rs132
Submitted Batch IDNA20431_snpassay_chr7
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss166294612|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TTCAGTGAAG TGTTCTGATC ATAATATACA GGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
 TGTGTGTGTG TGTGAATAAA GTTAAGAGGA ACTAGAACAG TGTACTGCCA GGCTCATAAT
 CAGGAGTGTT GCACAACCAT GCTGGAATAA TGCCTGGAGG ACTGGTATCA GGAGCAACCC
 AAGGCTTGCA AACAGCAGTG GTGAAAACTA AAGGGCTTTG TGGACACATA GCCAGAGCCA
 GATGCACAAA
 Y
 AGAAGATAAG CTTCTGGGTG TGGAAACTCT TCACAAAGCA TCGGGGGTCA AGAGGATTGC
 TCCAATCCCA GTTGTTTTCC ATCTTTTTTC TTCAAGGAGA CGTACTAACG GGAAAGAATA
 AAATAACCAC AGAGAAGACA AACTTGAAAC CCACGACAGA GAAGAGATAG GAAATGTGCA
 CCCAGCTCTG CTAAATGGGT TCTGGATACC AATTTAGCCC AAACAGATGA GGGGACTGAA
 TGACTTCAGT

  Submitted Frequency for ss166294612 back to top
There is no frequency submission for ss166294612.


  dbSNP summary of Genotypes for ss166294612 back to top
No sufficient data to compute Hardy-weinberg probability for ss166294612.


  Submitted individual genotype for ss166294612 back to top
There is no individual genotype data for ss166294612.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement