NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss166318118           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr1_31086772
RefSNP(rs#)rs10753238
Submitted Batch IDNA20431_snpassay_chr1
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss166318118|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 TCAATTGCTT CCTCCTTTCT TGTGCCACTG GATATGGCAG GGCGGATCAG CAACTGGGAA
 CCTTAAGAGC TTGCAGGTTG AGAGCTGACA GAGTGGACAG CTGGCTTAGC AGGCTGGCCC
 TGGGCCAGGC CAGGGTTGCA ACCTCACGTC CTGCAGCTTC CAGCGCCCTC TTGGACAGAG
 ACAGATGATT CCAGCTCTCC AAGTCCAATT CTGCCTCTCC TTGGGATATT CCCTAATGCC
 TGAGATCACC
 R
 CCATGTCCTA TTACCTCCTC CACTCTTTAC CCTCAAGATG TTCATTATCT GTCCTCTTGT
 TCCTCTCCTT TCCTCAAGCT CACTTGTGGA TCTGACTGCT GTACTGCCCA CGGCACCTGC
 TGCACCAAGC CTTCCCTCCC CACAGGCCCC ATGCATACGC TGTTTTCCCT GGCTTATTTA
 TTCCTCCCTG CCTTGTCCCT CATCTGTTAA GACTCACCCT AAGTGTCAAG TGTGCCAGGA
 AAACCTTCTG

  Submitted Frequency for ss166318118 back to top
There is no frequency submission for ss166318118.


  dbSNP summary of Genotypes for ss166318118 back to top
No sufficient data to compute Hardy-weinberg probability for ss166318118.


  Submitted individual genotype for ss166318118 back to top
There is no individual genotype data for ss166318118.