NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss166918924           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr1_101863538
RefSNP(rs#)rs10874498
Submitted Batch IDNA20431_snpassay_chr1
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss166918924|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 GATTGAAGGA TGGAAAGTAT TGATCCTGGG TGTGTCTGTA AGGGTGTTGC CAAAGGAGAT
 TAACATTTGA GTCAGTGGGC TGGGAAAGGC ATACCCACCC TTAATCTAGG TGGGCACAAT
 CTAATCAGCT GCCAGCATGA CCAGAATAAA AGTAGGCAGA AAAATGTGGA GATATTAGAC
 TGTTGTAGCC TCCCAGACTA CATCTTTCTC CTGTGCTGGA TATTTCCTGC CCTTGAACAC
 TGAACTCCTA
 R
 TTCTTCAGCT TTGGGACTCA GACTGGCTCC TTTGCTCCTC AGCTTGCAGA TGGCTTATTG
 TGAGATCTTG TGATCCTGTG AGTTAATATT CCTTAATAAA CTCCCCTTTA ATATACATCT
 ATCCTATTAG TTCTGTCCCT CTAGAGAACC CTGACTAATC TAGGCGCAGA TCCCTCATGG
 CTTGGTGCTG TCTCCATGGT GGTGAGTTCT CAAGAGATCT GCTTGTTGTA AAGTGTAGCA
 CCTCCCCTAC

  Submitted Frequency for ss166918924 back to top
There is no frequency submission for ss166918924.


  dbSNP summary of Genotypes for ss166918924 back to top
No sufficient data to compute Hardy-weinberg probability for ss166918924.


  Submitted individual genotype for ss166918924 back to top
There is no individual genotype data for ss166918924.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement