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Submitted SNP(ss) Details: ss167133556           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr1_152815345
RefSNP(rs#)rs2072660
Submitted Batch IDNA20431_snpassay_chr1
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss167133556|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 GGAGGATGGA CGAGTGAGCT ACCAGGAAGA GGGGCGCTGC CCCCACAGAT CCATCCTTTT
 GCTTCATCTG GAGTCCCTCC TCCCCCACGC CTCCATCCAC ACACAGCAGC TCCAACCTGG
 AGGCTGGACC AACTGCTTTG TTTTGGCTGC TCTCCATCTC TTGTACCAGC CCAGGCAATA
 GTGTTGAGGA GGGGAGCAAG GCTGCTAAGT GGAAGACAGA GATGGCAGAG CCATCCACCC
 TGAGGAGTGA
 Y
 GGGCAAGGGG CCAGGAAGGG GACAGGATTG TCTGCTGCCT CCAAGTCATG GGAGAAGAGG
 GGTATAGGAC AAGGGGTGGA AGGGCAGGAG CTCACACCGC ACCGGGCTGG CCTGACACAA
 TGGTAGCTCT GAAGGGAGGG GAAGAGAGAG GCCTGGGTGT GACCTGACAC CTGCCGCTGC
 TTGAGTGGAC AGCAGCTGGA CTGGGTGGGC CCCACAGTGG TCAGCGATTC CTGCCAAGTA
 GGGTTTAGCC

  Submitted Frequency for ss167133556 back to top
There is no frequency submission for ss167133556.


  dbSNP summary of Genotypes for ss167133556 back to top
No sufficient data to compute Hardy-weinberg probability for ss167133556.


  Submitted individual genotype for ss167133556 back to top
There is no individual genotype data for ss167133556.

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