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Submitted SNP(ss) Details: ss16745162           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr17.NT_010718.14_16250407
RefSNP(rs#)rs3816511
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600402629083.F 219 32HuAA506s19600402993896.R -317 31

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16745162|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 TGGGGGTGAC CCACTGCCCG CACCAGAGCT CTGCGTCCAT CAGCTTGAGG GTGTCCAGAT
 GGGACCGGGA TCCCCTTCAT CCCCCAGAGC CACTGGGGCA ACACTGACTT GGAGCCTTCA
 GAGCGCAGGC GGGAGAGGGG AGGGGAGAGG GGCCGGCTGC CTGCTGGGTC CTGCAGGCCG
 CATTGTAAGC TACCATGGCC
 R
 CTCTGACCTG GGAGCCCTGG AGTGGGCCTG GCTGACGGCA GCCTGTCCTG AGCCTGCCCT
 GGCCACAAGG AAAGGTTCTA GAGGGAGAGA CAGGGCCAGT CGGGCAGCCA CGCCCCCACC
 CGCCGCAGCC CCTACTCACT CTTCGTATAG GAGAGCCACT ATGTAGGTGA GGGCCACCAG
 CACCGTCAGG AGCAGGCCCG

  Submitted Frequency for ss16745162 back to top
There is no frequency submission for ss16745162.


  dbSNP summary of Genotypes for ss16745162 back to top
No sufficient data to compute Hardy-weinberg probability for ss16745162.


  Submitted individual genotype for ss16745162 back to top
There is no individual genotype data for ss16745162.

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