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Submitted SNP(ss) Details: ss167543547           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr1_224656581
RefSNP(rs#)rs1805404
Submitted Batch IDNA20431_snpassay_chr1
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss167543547|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 ACCTGGAAAA ACAAAATACC AAATATCATG CAACAGATGA TGCTGAGTCC AGGAGGTGTT
 GCTGAAATAA CATGGGCACC ATACGCTTGA TCTGCACATG TGGGAGAGGG CAAGCTGGGG
 GAGGTTTGCT TTGCTCTCTG AGACGAGGCC CTCCTGGGAG CTTCAGGGTG GGGGCTGAAT
 GCCCATGCTG CCCCAGTATG TACACACCTG TCACTCCTCC AGCTTCCGCT GTCTTCTTGA
 CTTTCTGCTG
 R
 TCATCCCACC GAAGCTCAGA GAACCCATCC ACCTCAACGT CAGGGTGCCG GATGGAGTGG
 CCCACCTTCC AGAAGCAGGA GAAGTGGTAC CAGTGTGGGA CTTTTCCATC AAACATGGGC
 GACTAGAAGG AAGAGAAACA GAGGGAAGTA AGTAAGCAGT TAACTTTTGA CTTAGACCCA
 CTAGACCTTG ACCTTGACCT CGACCCCAGT CCCAGCCCCA GCAGTGGGAT AGCACATGAA
 ACTTTTGTTC

  Submitted Frequency for ss167543547 back to top
There is no frequency submission for ss167543547.


  dbSNP summary of Genotypes for ss167543547 back to top
No sufficient data to compute Hardy-weinberg probability for ss167543547.


  Submitted individual genotype for ss167543547 back to top
There is no individual genotype data for ss167543547.