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Submitted SNP(ss) Details: ss167743269           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chr10_6354227
RefSNP(rs#)rs1544198
Submitted Batch IDNA07022_snpassay_chr10
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss167743269|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 GAGGATAGAC CAGAGGGTGG GATAGACAGT TGCCCCTGCC CCGATGGTGG CTGCCATCCA
 GCAGGGAGGG CAGATGTGAA GCATTACATA CGTGCTTACT TGCCATTGTG CATGTATGTT
 GTATGTTATG AACAAGTGCA AAGCACCCCG AGTTCACAGA CAGGGGCTGT AACTGTCTAG
 TTTGGTGAAT GGCTGATGAA GGCAGTGCTG GGAGATGATA AATGTCCCTT CTGTCCCTTA
 GGACTTGCAG
 R
 TAATGGTCTC CTGTGTCCCT CCCTTGACTC CAGGCTGTCT AGTGAAGGTG ATCGTTCCAA
 TTGCCCTATT AGGACATCGG GGTTTCTTAA CTAAACCCTG AATGATGCCT TGGATTTATG
 CATTCTGGCC AACGTGTTGA AATACGTCAG TCTGGCTGGG CACGGTGGCT CATGCCTGTA
 ATCCTAGCAC TTTGGGAGGC CGAGGCGGGC GGATCACCTG AGGTCAGGAG TTTGAGACCA
 GCCTGGCCAA

  Submitted Frequency for ss167743269 back to top
There is no frequency submission for ss167743269.


  dbSNP summary of Genotypes for ss167743269 back to top
No sufficient data to compute Hardy-weinberg probability for ss167743269.


  Submitted individual genotype for ss167743269 back to top
There is no individual genotype data for ss167743269.

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