NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss167948221           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chr16_16188655
RefSNP(rs#)rs4369696
Submitted Batch IDNA07022_snpassay_chr16
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss167948221|allelePos=251|len=501|taxid=9606|alleles='A/C'|mol=Genomic
 GGCTTGCCAT TATGGGCTGG GGTGGCCCCC ACATCCCCCA TCCCTCCCAC ACCCCTCCTG
 CCAGACTCAG CACTCACCGC TTCCAGAGGA ACTTGAGTCT ACGACACCAG GGTCAACTTC
 TTCCAGGCAG AGGAAGGTGA CCAGACGGTC AAAGGACACC CGGGCCTAGG AAAACCGAAG
 CCGCAGGTCA CCCAGCAAGA AGAGCAAAGA ACTCAGGTTT TGGGTGTCGG TGTCTCAAGA
 TGTGTGGCAA
 M
 AGCTTCCTGT CTACCAAGCT CTGTGCATAG GAGGCGTGAG GACAAAGCTT TCTAGTTCAT
 GGGAAACGAT GCAACCCGAG TGGTGACCTT GATGGTGGTG ATCTCCCACC TCTGCGATCC
 TACAAATCAG TGACACCGAA GCAAGCCAGC TGCCATTCTG CAGACAAGAT CTGGGAAGAG
 GATGGTGGCT TTTCCAATAA GGTTATCAAG CCATTGTGTG GAACAATTTC AAATGTTGTC
 CACCTGGGGG

  Submitted Frequency for ss167948221 back to top
There is no frequency submission for ss167948221.


  dbSNP summary of Genotypes for ss167948221 back to top
No sufficient data to compute Hardy-weinberg probability for ss167948221.


  Submitted individual genotype for ss167948221 back to top
There is no individual genotype data for ss167948221.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement