| Submitter | | Handle | CSHL-HAPMAP | | Submitter SNP ID | CSHL-HuAA-200402.chr22.NT_011520.9_17866380 | | RefSNP(rs#) | rs84473 | | Submitted Batch ID | CSHL-HuAA-200402 | | Submitted Date | Feb 17, 2004 | | Publication Cited | [1] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Feb 17 2004 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_011520
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CSHL-HUAA-200402 | | Ascertainment Samplesize | 6 | | Population | N.D. |
| | Allele | | Observed Allele | T/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c/t_g |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence position qualityHuAA506s19600402774828.R -369 68HuAA505s19600402504625.F -259 43HuAA505s19600402196662.R -363 52HuAA505s19600402504793.F -190 39HuAA503b19000149737100.R 376 35 |
>gnl|dbSNP|ss16920015|allelePos=501|len=1001|taxid=9606|alleles='T/C'|mol=Genomic TGGGCAACAC AGTGAGACTC CATCTCAAAA AAAAAAAGCC TTTATCAtaa aaggcaagtt
attggttacc cttctttggg aagaggggac aaaaggaggg cttctggggt gctgtaatgt
cctatctcta gattcgagtg gtggttacac aggtgtttgt gataaatcac tgagctgtat
atcattttct ctatatgtgt tatattttgc tatttttgaa aagtttaaaG AGAGAAAACA
GGAGGAGAAG AATGAAGAca gtggaatata agcagtctct ggaggaaaaa gtagagtcaa
gaaataattt ttttttaaag aaaaaaataa cccattgtat agcgatggaa aATAACTTAG
Gtcaggacat tataacagaa aactacagac tgggaggctt aaacaacctt tatttctcac
agttctagag gctaggaagt ctatgatcaa ggtgctggct gatagagttc ctgatgaggg
ttcacttcct ggtttgcaga
Y
ggctatcttc tcgttgtgcc ctcacatggc agagacagat catctctttc ttgcctcttc
gtctaagggc actaatccca ttcatgaggg ctccatcctc atgacctaat cacccccata
gtgctctacc tcctaatacc atcacacgag ggattggggc ttcaacatat gatttcgggg
ggatactttc aatccatagc aAAAAATATA TAGTAGAAAA GGGGAAAGTG TTATGTAGGA
AAGAGGGGAG ATAATTGTTC AAATGGTGTC AAGAAGTAGA TGACAGGAGA TGATGGCCTT
GAATGGGGGG ACCACCCTCA GCTAAACACA TCGGTGCTGA CAACAGGGAA TGTGGAgtag
gcggggacag aggtgtgtgc atggggtaga gggaattctc ctctggctat ttctattttc
tcagcgagac agcagcaggg ctatcagctg agagtaagcg tggaggggaa ggggctgcag
gctgagggga gggaaggagg
There is no frequency submission for ss16920015.
No sufficient data to compute Hardy-weinberg probability for ss16920015.
There is no individual genotype data for ss16920015.
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