NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss170175160           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr10_62169533
RefSNP(rs#)rs9414742
Submitted Batch IDNA19240_snpassay_chr10
Submitted DateOct 01, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPOct 1 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss170175160|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TTTTAAATAC ACAATAAATA TCATGGCTTA GCAATCTTTT TATCAAAATC AAGTGGAATG
 AGAGTATAAT GTTTATTTAT CAAGTTAGTT TTGCAATCCC ATGTAGAATA TGGTTAAGTA
 ACTTATTTTA GTGTCTATTT CCATTTCTTA ATCCTTTAAG TTTTTCTAAA ACATTTGAAA
 GGAAATAGAG ATTATCTGAT ATATGCTGTA AAATGACAAA CATTGTCTGA CTCAACATAT
 TTGAGATAAC
 Y
 AATTGTTGAT TTTAAAAATC CAGTCCCAAA GTAGCTTATG AAATAGGATA AGAAACTTCA
 TATTAGAGTT ACAGAAGACA AAATAATCAG TGTGATTCAT TCTACTTTAT CTCCACATTT
 TGACTGGAAC TTTTCATCAC TTCTTTTTAT TCACTTTGGT CTGGGATTTC AAAAACATTT
 AAAGTGATGG CAATATGTAT AATGGTAATA TCAATCTTTA AAAATACACA TAAAAAGTTA
 ACATAAAGGA

  Submitted Frequency for ss170175160 back to top
There is no frequency submission for ss170175160.


  dbSNP summary of Genotypes for ss170175160 back to top
No sufficient data to compute Hardy-weinberg probability for ss170175160.


  Submitted individual genotype for ss170175160 back to top
There is no individual genotype data for ss170175160.