NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss170175253           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr10_62170843
RefSNP(rs#)rs2127350
Submitted Batch IDNA19240_snpassay_chr10
Submitted DateOct 01, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPOct 1 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss170175253|allelePos=251|len=501|taxid=9606|alleles='G/T'|mol=Genomic
 TCTAATGGCC TTGTATGGAA CTTCTTCACC TAGGAATTCT AATCATATAC TACTTACATG
 ATATGAGTCT TGAACTTCAA ATCTGGATTT TTCTATTTAA ACCAGAAAGT AAATAAATGT
 AATAAAAATA GAAACATACC AACACAACTC CCCAAAACTA TGTGCAGCAA CTCTGGCTAC
 ACTCTCAGAG AGACCCCAAC ATTTTTGGTT ACTTGGACAT CCTGTAACTG ATCATTTTAT
 TTTGCCACAC
 K
 CTTCCCCTAG CACACTCTTT CAAGTACAGT ATATAGCTTG CTTAAATTTC ACATTGAAAG
 TTTTGGAAAG CCATATGAAA TTATTCCAGA TAGCTGCAGG TTGCTAATAA AACCATAGTT
 AGGGATCACC AACTTAGTAA AAATTGAAAC TAGAGAAACA GTCTTCATAA TCTTTAGCCG
 AGGCAGTCCC TTCTTTCCAT ATTATCATCA CTTTCTGTTC AAAGCACATA CTTTTCATGC
 TTCTGTGTAT

  Submitted Frequency for ss170175253 back to top
There is no frequency submission for ss170175253.


  dbSNP summary of Genotypes for ss170175253 back to top
No sufficient data to compute Hardy-weinberg probability for ss170175253.


  Submitted individual genotype for ss170175253 back to top
There is no individual genotype data for ss170175253.