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Submitted SNP(ss) Details: ss170210116           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr10_125853
RefSNP(rs#)rs7906287
Submitted Batch IDNA20431_snpassay_chr10
Submitted DateOct 01, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPOct 1 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss170210116|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 GCAACATCAT GTGCAAATAA GTGTTTTCTG AAAATCTCAT TTTAATTGCT TTTTTAAAAG
 AGACAAGATC TATCTTGCCC AGGCCACAGT GTTATTCACA AACACGATCA TGCACTGTAA
 CCCCAAACTC CCAGGCTCAA GTAATCTTCC CACCTCAACC TCCCAAGTAA CGTAGATAGG
 ACTACAGGCA CATGCTCCCA GCCTGCTACT TTCTTATTTA GCAACCTCTT AATCTTAAAA
 TGAGAGCAGA
 R
 TATCCCTCAT CAACTGCTAG GAAATAAAGA TGGTGTGTCA TGTCATATTC AAATATAAAG
 AAGAAATATA TTTCTATAAG GTTAATAATT AAAAAAATAA CATATCTAGC TAAATAAAAT
 AAATTATTTG CACACGGGTC CAGGATATTA AAACAACTAA AAAGCAGAGA GAATTATTCC
 AACTTTTTTT AGTGTTGCAA AATGATATTT TCAAAGCAAC TTAACTTTTA AAGTTATCTT
 CAGTTACCAA

  Submitted Frequency for ss170210116 back to top
There is no frequency submission for ss170210116.


  dbSNP summary of Genotypes for ss170210116 back to top
No sufficient data to compute Hardy-weinberg probability for ss170210116.


  Submitted individual genotype for ss170210116 back to top
There is no individual genotype data for ss170210116.

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