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Submitted SNP(ss) Details: ss170681872           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr10_89613881
RefSNP(rs#)rs2943772
Submitted Batch IDNA19240_snpassay_chr10
Submitted DateOct 01, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPOct 1 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss170681872|allelePos=251|len=501|taxid=9606|alleles='C/G'|mol=Genomic
 GTGGGCTCGG GCGGGAGCCG GCTGAGGCGC GGCGGCGGCG GCGGCACCTC CCGCTCCTGG
 AGCGGGGGGG AGAAGCGGCG GCGGCGGCGG CCGCGGCGGC TGCAGCTCCA GGGAGGGGGT
 CTGAGTCGCC TGTCACCATT TCCAGGGCTG GGAACGCCGG AGAGTTGGTC TCTCCCCTTC
 TACTGCCTCC AACACGGCGG CGGCGGCGGC TGGCACATCC AGGGACCCGG GCCGGTTTTA
 AACCTCCCGT
 S
 CGCCGCCGCC GCACCCCCCG TGGCCCGGGC TCCGGAGGCC GCCGGCGGAG GCAGCCGTTC
 GGAGGATTAT TCGTCTTCTC CCCATTCCGC TGCCGCCGCT GCCAGGCCTC TGGCTGCTGA
 GGAGAAGCAG GCCCAGTCGC TGCAACCATC CAGCAGCCGC CGCAGCAGCC ATTACCCGGC
 TGCGGTCCAG AGCCAAGCGG CGGCAGAGCG AGGGGCATCA GCTACCGCCA AGTCCAGAGC
 CATTTCCATC

  Submitted Frequency for ss170681872 back to top
There is no frequency submission for ss170681872.


  dbSNP summary of Genotypes for ss170681872 back to top
No sufficient data to compute Hardy-weinberg probability for ss170681872.


  Submitted individual genotype for ss170681872 back to top
There is no individual genotype data for ss170681872.