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Submitted SNP(ss) Details: ss170931927           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr13_28099188
RefSNP(rs#)rs1771178
Submitted Batch IDNA20431_snpassay_chr13
Submitted DateOct 01, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPOct 1 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss170931927|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 CCTGGGGCCT CTGGCTGTGG GGTGATCATG TTCTTGTGCT TTTGTCCATC CTAAACAGTC
 AAAAATGTGT CCTGCCACAG GTGAGGCCTG GAGCTAGGAA GGGGTATGTG CTCAATGGTT
 TTATGTGTGC ACGGGGCTGG GGATGAGGCA GTGAAGGTGA AGGCTCATAG CTTTCTGCTC
 ACAATCCTCC AGGCCATGTG ACATCCACGC AGATGAGGGC ATTCAGCACC ATTTCCTTGC
 ATTGAATATT
 R
 AAGAATAGCT AATCATTCCC TAAGATCATT TTGAAGGTAA CAGCAATAAT AATGTCCTTG
 TGAATGTCAT GTTATGCCCT GCACTTCACA CACACTTTCT CATTCAGTGC TTCTCCACAC
 CGTAGGAGGA GGTATGAAAA GCCCCCTTTT ACAGATTAGG AGTGTCTGTG GGCAGTGTAT
 AAAAATGTAA GTGGAGACTT ACCCCTTACG TATATGCATG TTTGCTCTCT TTATAACATG
 AACATCATGC

  Submitted Frequency for ss170931927 back to top
There is no frequency submission for ss170931927.


  dbSNP summary of Genotypes for ss170931927 back to top
No sufficient data to compute Hardy-weinberg probability for ss170931927.


  Submitted individual genotype for ss170931927 back to top
There is no individual genotype data for ss170931927.

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