NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss170932347           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr13_28121953
RefSNP(rs#)rs6490319
Submitted Batch IDNA20431_snpassay_chr13
Submitted DateOct 01, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPOct 1 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss170932347|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 TTTTTTTTTG GAGATAGAGT CTCGGTGTAT CCTCTAGGCT GGAGTGCAGT GGTGAGATCT
 CGGTTCAATG CAACTTCCGC CTCCCGGGTT CAAGCGATTC TCATGCCTCA ACCTCCCTAG
 TAGCTGGGAT TACAGGCATC TGCCACCATG CCAGGCTAAT TTTGTTTTGT ATTTTTTAGT
 AGAGACAGGG TTTTGCCATG TTGGCCAGGC TGGTCTCAAA CTCCTGACTT CAGGTGATCC
 ACCTGCCTTG
 R
 CCTCCCAAAG TACTGGGATT ACAGGCATGA CCCACTGCAC CTGGCTGGCT ATATTTAAGA
 GACAAGAAAA AGCGTCACCT TCTTGCATAC TTGAAAGTAA GAGAAAAACC AATTATGGTT
 GAATGGAGAT AAACATCTAT TGCATAGGTG TCATTTTCTA GGATTTCTCA ATCTCGCCAA
 CTTAACAAAA AAATATTGCG ATACATGGTA TTAGTGATCA AAATATTTGC TGCCCTTCAA
 GTTGAAAGAG

  Submitted Frequency for ss170932347 back to top
There is no frequency submission for ss170932347.


  dbSNP summary of Genotypes for ss170932347 back to top
No sufficient data to compute Hardy-weinberg probability for ss170932347.


  Submitted individual genotype for ss170932347 back to top
There is no individual genotype data for ss170932347.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement