>gnl|dbSNP|ss17150221|allelePos=501|len=803|taxid=9606|alleles='T/C'|mol=Genomic
TTTGTTACCT CTCACTCTCA TATAATTTGC TTTAGCTAAC AGCTCTTGCA TATTTATATT
ATTTTATTTG CTCTGTACTT GGTGTTTTTA CACAGTAATA ACTTGGTGGC TAATCTTATC
TACAACTATG GCTTTCACCA CTAGCAGTAT TTTGACAAGT CTCAAATATA TATCTTCCAA
GAGATATTTC CCTCCAAAGT CCAAACAAAG ACTTACTAGA AACCTCTATT TACATATTGT
ACAAACATCT CAGAGTCCGC ATGACTTAAA CAGAATTCAC TCCTTTTTCT TCTTTCCATT
ACTGACGTCA TCAACTTTCT GTGTGTTTTA AGTTTGTTGT AAGTATCAAT CATTACAGAC
CCATGCAAGC CAGACCCTTC TTCATCATTC ACTAATCTGA TCCATCGCTA CAGTTTTGCT
TAACACAATA ATTTGCCCTG TATTTTCTTT TGCTTACATA CTcactgcca ctgtcctaat
ttaactcccc ataatgtctt
Y
cctggattac agtaatcatc ttcttacaga acttcctttc caggtttaca ccaacaaacc
atgttatata ctgcccccag agtaaacttt ctacaaaaca caTGCACTTT CTACTGGTGA
AAGATGACAG AGTAAAACCA TGTGTACTCT ATCCCCTTCC TTTGATTTTC ATGAAAAGAA
AAAAAGATGA AAAGTATAAG AGGAAAATAT ACATATTAAA TGAAGAAGTA ACACCAAAGC
AATATCAAAT TATTAAGGAA ATATTTCAAA TATAGTGAAA CTTGAAACAT TTTGATATAA
AA
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | C=0.79203540
| T=0.20796460 | C/C=0.63716817
C/T=0.30973452
T/T=0.05309734
| Pr(chiSq=0.404,df=1)
=0.527 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | C=0.90697676
| T=0.09302326 | C/C=0.86046511
C/T=0.09302326
T/T=0.04651163
| Pr(chiSq=8.658,df=1)
=0.005 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | C=0.92441863
| T=0.07558139 | C/C=0.84883720
C/T=0.15116279
| Pr(chiSq=0.084,df=1)
=1.000 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | C=0.92477876
| T=0.07522124 | C/C=0.85840708
C/T=0.13274336
T/T=0.00884956
| Pr(chiSq=0.238,df=1)
=0.655 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | C=0.91836733
| T=0.08163265 | C/C=0.83673471
C/T=0.16326530
| Pr(chiSq=0.061,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | C=0.93902439
| T=0.06097561 | C/C=0.87804878
C/T=0.12195122
| Pr(chiSq=0.020,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | C=0.95882350
| T=0.04117647 | C/C=0.91764706
C/T=0.08235294
| Pr(chiSq=0.013,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | C=0.78977275
| T=0.21022727 | C/C=0.60227275
C/T=0.37500000
T/T=0.02272727
| Pr(chiSq=1.471,df=1)
=0.251 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | C=0.84444445
| T=0.15555556 | C/C=0.69999999
C/T=0.28888890
T/T=0.01111111
| Pr(chiSq=0.893,df=1)
=0.371 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | C=0.81000000
| T=0.19000000 | C/C=0.68000001
C/T=0.25999999
T/T=0.06000000
| Pr(chiSq=1.206,df=1)
=0.273 | Genotype
Freq. |
| HAPMAP-MKK | 284 | 284 | C=0.73943663
| T=0.26056337 | C/C=0.53521127
C/T=0.40845069
T/T=0.05633803
| Pr(chiSq=0.511,df=1)
=0.479 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | C=0.73863637
| T=0.26136363 | C/C=0.53409094
C/T=0.40909091
T/T=0.05681818
| Pr(chiSq=0.312,df=1)
=0.584 | Genotype
Freq. |
