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Submitted SNP(ss) Details: ss171580657           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr13_94660410
RefSNP(rs#)rs943288
Submitted Batch IDNA20431_snpassay_chr13
Submitted DateOct 01, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPOct 1 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss171580657|allelePos=251|len=501|taxid=9606|alleles='A/T'|mol=Genomic
 TCCCATATGC CCTGGGGCTC CCCAGTACCC CAAGAAAACC TGTACTACAG TGCCCACCAC
 ATACTCCAGT AATTTACTTG TGTGTTTGTC TCCCAGACAG GCAGTGAGCT TCTTCAGAAC
 AGAAACCAAG TCTTATTCAT TGTCCCTGAC ACTGAGCGGA GGCTTTAGTT CATTCTGATG
 AATGAATAAT TGGAAAAAAG AAGTGGTCCT AGTGCAAAAT GAATATGGCC AGCAGCTAGA
 ATGCCCTGGA
 W
 AAATGATACC GCTACAAGGT AAGTATTAAA CAATGGATAC TGGGCGGGTA TGGTGTTCAC
 ACCTGTAATC CCAGCACTTT GGGAGGCCAA GGTAGCGAGA ATCGCTTGAG GCCAGAATCT
 TGAGACCAGC CTGCGCAACA AGGCGTGATC CCTTCTCTAC AAATAATAAA AAAAGAAATT
 AGCCAGCAAT CCTTTTGTAG TTCATGAGCA TGATAATCGG GTGTTCACGC ACTTGTGTGA
 GATGTGCCAC

  Submitted Frequency for ss171580657 back to top
There is no frequency submission for ss171580657.


  dbSNP summary of Genotypes for ss171580657 back to top
No sufficient data to compute Hardy-weinberg probability for ss171580657.


  Submitted individual genotype for ss171580657 back to top
There is no individual genotype data for ss171580657.

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