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Submitted SNP(ss) Details: ss17169805           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr7.NT_007819.14_24232495
RefSNP(rs#)rs131
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA508s19600403326454.F 144 68HuAA506s19600402787021.F 572 41

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss17169805|allelePos=501|len=756|taxid=9606|alleles='C/G'|mol=Genomic
 ATGGAGCCTA ATAACGAATT CTAGCCCAAC CTCCGGCTTA AACAAAGCAA GAACTCCCTC
 TATAACATGG CTAGATCATC ACTGCTTGAC CACTTCCTGT GACAGAAACA AGGCACTTCA
 TTTCACCTTT TTAAAAATCT ATTCTAGACA GTTTGTCATC ATTTAGAGCT GAAATAATGA
 CTCACTATAA TTTCATGCGC TGCTCCTAGA TTTGCCCTTG GTAACTACAT AGAACAAGAC
 AGAACTTTTT TTTAACCATA ACCTGCACTG AAACCACCAC CATCCCCACA TCCCACCCAG
 CAAATCTTTT CTTCTCCAGA CTAAACAGCC GCATTGTCAT CATCATCCAT TTCTTATGGG
 ACATGGATCA AGAGCCCTTG TGATCCCAGA TGTTCAACTT TGATCACCCT TCAATTTGTG
 CTTCTCTAAC AGTGATGCCC AGATTTAAAG ACAAGCTCTA GGTGTGGTCT GGACAGAGCA
 GAAGAGAAGG CAATGACAAT
 S
 TTCCTGGCCT CAACCACACT GCAACTGTTA ATACTGCTGG ATTTGCCTTA GCTTTGGGGG
 AACTTGCATC TCTTTCCAGT TCTCAGTGTT CTTACTGGGA CTGTCAGGTC ATAGGGATTT
 CTGAGAAGTT GGGCTTCCTT CTTTCTGAAG CGGACTCCTT TACTTCCTTT AACTAAAATT
 CAGGACTTGA CTGTTCTATT ATTATTACCA TCATTATAAT CATTATTAAA TTATCACATG
 TTAATTTTGA CCCAT

  Submitted Frequency for ss17169805 back to top
There is no frequency submission for ss17169805.


  dbSNP summary of Genotypes for ss17169805 back to top
No sufficient data to compute Hardy-weinberg probability for ss17169805.


  Submitted individual genotype for ss17169805 back to top
There is no individual genotype data for ss17169805.

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