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Submitted SNP(ss) Details: ss17177821           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr7.NT_007819.14_24259604
RefSNP(rs#)rs124
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA508s19600403428919.F 306 57

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss17177821|allelePos=270|len=563|taxid=9606|alleles='G/A'|mol=Genomic
 GTCTAGAACA ATTACCCCTC AGGTGTACTG AATTGGGGAT GATAGTGACC TACTGGCACC
 TATAGAAGTA GTGTTTATAA GATGGACTCC ATTTCATACA AAGCTTTCCA GTTTTCAGTT
 TGAACGTGTA GGGTTATGCC ATGCCCCTGA TCAAGTTTCT TTAGTGGATA TTCATTACCT
 GTAACAAATA AGAGGTCATC TAGCTGCAAA TCAGAATCAT CCATGGACAA TGTAAAGAAA
 AACAGATGCT CAGGACATGC TCTACCTGA
 R
 TATTCTAATT CAATGGTCCC AGGATCCAGG TATAAACATT TTTTTAAAAA AAGCTTTCCA
 GATGATTGAA ATGCATACGA TTGAGGACTA CTGGCTTGCA AGAGGAAGTC TCTGTGTTAC
 ATACAAGGCT CAATTACCCC CACTTTTCAG CTGACATTTC ACCTTCCAGC CACACAAATC
 CACTTGCAGT TCTCTACAGA CTATCTCCAC ACCTTTGTAG CAGCCATGCC CACCCTTACT
 GTGGGCACAG CAGAGTGGCC ACTGTATAAG GTCGCAGCTC AAATGAGGCC TTC

  Submitted Frequency for ss17177821 back to top
There is no frequency submission for ss17177821.


  dbSNP summary of Genotypes for ss17177821 back to top
No sufficient data to compute Hardy-weinberg probability for ss17177821.


  Submitted individual genotype for ss17177821 back to top
There is no individual genotype data for ss17177821.

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