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Submitted SNP(ss) Details: ss172003625           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr22_39496081
RefSNP(rs#)rs11806
Submitted Batch IDNA20431_snpassay_chr22
Submitted DateOct 01, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPOct 1 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss172003625|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 GGACTCTAAG GAAGGTTTCC AAATGAAATA ACCTCAACCA GATGTTTATT TTCAAAATAT
 ACGGCCTACA CCAAGTTTAT AAAGGGAGAT AATATCCAGA CCTCAACAAG ATATCTGCTC
 CCCTTCTCAT TTTTGTGATT TTTCCCATCT GGTTGCAAAC TCAACGTAAT ACCTTAATAA
 AGAGCAATTT TCAAGAATAT CTTTTTTGTG CTGACCATTT ATTGGGACTT GACTGACCAG
 GGCTTGTAAG
 R
 ATGGACACAA AACTTCAAGT CTTTCGTAAT GAAAGGATTG ATTCAAAATA AATATTCTAA
 AAATTATGTC AAACACTAAT GAATAAGTGA CATTTACAAA TAGTTTATAA GAGAATCATT
 TGGGTGAACA ATTTTCATTT CACAAAATAA ATAGCTCATA TCCAAAAAAG ACACCTCTCC
 TTAAGCAGGG AAAAAAAAGC CCAACAAAAA TAAAGTCATG CCCGTGGCAC AGCCCTAATG
 TTAGTTTTAG

  Submitted Frequency for ss172003625 back to top
There is no frequency submission for ss172003625.


  dbSNP summary of Genotypes for ss172003625 back to top
No sufficient data to compute Hardy-weinberg probability for ss172003625.


  Submitted individual genotype for ss172003625 back to top
There is no individual genotype data for ss172003625.

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