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Submitted SNP(ss) Details: ss17356647           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuCC-200402.chr1.NT_004487.16_12686849
RefSNP(rs#)rs9633306
Submitted Batch IDCSHL-HuCC-200402
Submitted DateFeb 19, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 19 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUCC-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuCC21b19000130982728.R 539 28

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss17356647|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 agcttcctag atctgtggat tggtgtctaa cattaatttg ggggaaattt tcactcatta
 ttgcttcaaa tattgcttct gctcttttct ctttttcctc tcctgggatt tccattacat
 atgtttacac cctttgtagt tgtcccccag cttttggata ttctgttatg agtttttatt
 ttcagtctgt tttctttttg cttttggtat tggactttct tttctttttt tttttttttg
 agatggagtc tcactctgtc gccaggctgg agtgcagtgg cagtggtgca atcttggctc
 actgcaacct ccgcctcccg ggttcaagtg attctcctgc ctcagtctcc caagtagctg
 ggattacagg catgtgccac catgcccggc taattttttg tatttttagt agagatgggg
 tttcaccatg ttggccagga tggtctcaat ctcatgacct cgtgatccac ctgccttggc
 ctcccaaagt gctgggatta
 Y
 atggacattt ttattgttat gtccccaagc ttggagattc tttcttcatc atgtccagtc
 tactaatggg ttcatcaaag gcattctttg tttctcttac actatatttt tttgtaatct
 ctgtgatttc ttttttgctt ttagaatttt catgtttctg tttacattat atacctgttc
 ttgcatgcta tctacttttt ccattaaagt ccttagcata gtccatagtc catagaagca
 ttaaatttct ggtctggtaa ttctagcgtt tctaccatat gcgattctgt ccagatatgc
 ttgttcagtc tcttcagatc tttaaactgt gttttttgtc ttttagtttg ccttataatt
 tttggttaaa aggtacacat gatgtactgg gtaaaaagaa ctgcagtaaa taggccttta
 gtaatgtagt ggtaaggtgt aggaagaagg ggaagtgtat tagttcattt tcatactgct
 atgaagaaat acctgagact

  Submitted Frequency for ss17356647 back to top
There is no frequency submission for ss17356647.


  dbSNP summary of Genotypes for ss17356647 back to top
No sufficient data to compute Hardy-weinberg probability for ss17356647.


  Submitted individual genotype for ss17356647 back to top
There is no individual genotype data for ss17356647.

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