Submitter | Handle | CSHL-HAPMAP | Submitter SNP ID | CSHL-HuCC-200402.chr1.NT_004487.16_12686849 | RefSNP(rs#) | rs9633306 | Submitted Batch ID | CSHL-HuCC-200402 | Submitted Date | Feb 19, 2004 | Publication Cited | [1] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 19 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004487
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CSHL-HUCC-200402 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | C/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence position qualityHuCC21b19000130982728.R 539 28 |
>gnl|dbSNP|ss17356647|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic agcttcctag atctgtggat tggtgtctaa cattaatttg ggggaaattt tcactcatta
ttgcttcaaa tattgcttct gctcttttct ctttttcctc tcctgggatt tccattacat
atgtttacac cctttgtagt tgtcccccag cttttggata ttctgttatg agtttttatt
ttcagtctgt tttctttttg cttttggtat tggactttct tttctttttt tttttttttg
agatggagtc tcactctgtc gccaggctgg agtgcagtgg cagtggtgca atcttggctc
actgcaacct ccgcctcccg ggttcaagtg attctcctgc ctcagtctcc caagtagctg
ggattacagg catgtgccac catgcccggc taattttttg tatttttagt agagatgggg
tttcaccatg ttggccagga tggtctcaat ctcatgacct cgtgatccac ctgccttggc
ctcccaaagt gctgggatta
Y
atggacattt ttattgttat gtccccaagc ttggagattc tttcttcatc atgtccagtc
tactaatggg ttcatcaaag gcattctttg tttctcttac actatatttt tttgtaatct
ctgtgatttc ttttttgctt ttagaatttt catgtttctg tttacattat atacctgttc
ttgcatgcta tctacttttt ccattaaagt ccttagcata gtccatagtc catagaagca
ttaaatttct ggtctggtaa ttctagcgtt tctaccatat gcgattctgt ccagatatgc
ttgttcagtc tcttcagatc tttaaactgt gttttttgtc ttttagtttg ccttataatt
tttggttaaa aggtacacat gatgtactgg gtaaaaagaa ctgcagtaaa taggccttta
gtaatgtagt ggtaaggtgt aggaagaagg ggaagtgtat tagttcattt tcatactgct
atgaagaaat acctgagact
There is no frequency submission for ss17356647.
No sufficient data to compute Hardy-weinberg probability for ss17356647.
There is no individual genotype data for ss17356647.
|