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Submitted SNP(ss) Details: ss17358940           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuCC-200402.chr1.NT_028050.13_8207531
RefSNP(rs#)rs11807493
Submitted Batch IDCSHL-HuCC-200402
Submitted DateFeb 19, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 19 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUCC-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuCC21b19000131968094.R 635 50

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss17358940|allelePos=362|len=562|taxid=9606|alleles='C/A'|mol=Genomic
 TCACCTCAAT TCAGTACTCT ATCTCGGTGA AATGAACCAG AATCAGATCT AAGGTGGGAC
 AAGTTACTTT CTTCAGGGGC TCCATAAAAG TCACAGTTTG GCCAAACCCA TCTATAGcag
 tgtttctcaa cttttttttt tcatcatcat tcccttaaag atcttttttt gatttttttc
 ctaatgccct tccatgcaaa tttaatacca cagatatacc ttgtaccaga ttacttattt
 tatatataca tatatatata tgctttatac ataaaaagta agAGTCATAT TTTGCCCAGC
 CATGAACCTA AAGGAAGTTT TTATATCTGA GGATTTGCTC CCTATGGACA TTTCAAAATA
 A
 M
 TGACTAAGTA GAATAGTAGA GATCTAGGTA ATTAAGCTTT GCTCTATGTT TTGGAAGATG
 ATTTTTCTCT TTCTAAAGTT AAAACAAAAG ATTTTAATTT AGACAAAATC ATTTTAAATT
 CAAAGCTATG GATTTTCTTT TTGGAGTTAA TGTAATCCCA AACAATGATA ATTGGGCTTT
 GTGTCATTTT GTGAAAATGC

  Submitted Frequency for ss17358940 back to top
There is no frequency submission for ss17358940.


  dbSNP summary of Genotypes for ss17358940 back to top
No sufficient data to compute Hardy-weinberg probability for ss17358940.


  Submitted individual genotype for ss17358940 back to top
There is no individual genotype data for ss17358940.

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